math

• Displaying Math in RSS feeds

stats

• Stella Copeland's Intro to Mixed Models in R

policy

• A Science-based Voter's Guide
• Holly Doremus on Adaptive Management

DRUG

• Lauren Yamane on Matrix Population Models in R

jekyll

• Displaying Math in RSS feeds

voting

• A Science-based Voter's Guide

grand-canyon

• Carl Walters on Surprises in Adaptive Management at the Grand Canyon

trade-offs

• Trade-Offs and Synergies in Floodplain Management - A Historical-Ecological Approach

ecobloggers

• Early Warning Signals: the Charted and Uncharted Territories
• I try to figure out when many trees will die together
• Quals Reading: Modeling Philosophy

likelihood

• Dave Harris on Maximum Likelihood Estimation

optimization

• Improved R Profiling Summaries

publication

• My first peer-reviewed publication: Economics and Ecology of Open-Access Fisheries

tutorials

• Don't R alone! A guide to tools for collaboration with R

quals

• A Draft Dissertation Proposal: Forest Disease Dynamics and Management
• Quals Reading: Sudden Oak Death
• Quals Reading: Modeling Philosophy
• Quals Reading: Modeling Philosophy
• Quals Reading: Four Reviews of Forest Epidemiology
• Qualifying Exam Reading List

ECL290

• Seminar in Ecological Stoichiometry: Day 1

SCB

• A Science-based Voter's Guide

papers

• Early Warning Signals: the Charted and Uncharted Territories

xts

• Ryan Peek on using xts and ggplot for time-series data

SOD

• The null model for age effects with overdispersed infection
• A Null Model for Age Effects in Disease with Multiple Infections
• A Draft Dissertation Proposal: Forest Disease Dynamics and Management
• I try to figure out when many trees will die together
• Quals Reading: Sudden Oak Death
• Quals Reading: Four Reviews of Forest Epidemiology
• Qualifying Exam Reading List
• A multi-species, age-structured model for forest disease
• Simulating Sudden Oak Death Dynamics

igert

• Multiple Goals in Floodplain Restoration - Workshop Notes

IGERT

• Trade-Offs and Synergies in Floodplain Management - A Historical-Ecological Approach

adaptive-management

• Carl Walters on Surprises in Adaptive Management at the Grand Canyon
• Holly Doremus on Adaptive Management

Rstudio

• A quick function for editing CSV files in R

knitr

• Printing R help files in the console or in knitr documents

history

• Multiple Goals in Floodplain Restoration - Workshop Notes
• Trade-Offs and Synergies in Floodplain Management - A Historical-Ecological Approach

lectures

• Jordi Bascompte on Mutualistic Networks
• Melinda D. Smith: Divergence in grassland responses to Fire and Grazing in N. America and S. Africa
• Carl Walters on Surprises in Adaptive Management at the Grand Canyon
• Jo Albers on Invasive Species in a River Network
• Holly Doremus on Adaptive Management

economics

• My first peer-reviewed publication: Economics and Ecology of Open-Access Fisheries
• Jo Albers on Invasive Species in a River Network

bbmle

• Dave Harris on Maximum Likelihood Estimation

video

• Trade-Offs and Synergies in Floodplain Management - A Historical-Ecological Approach

mathjax

• Displaying Math in RSS feeds

notes

• A multi-species, age-structured model for forest disease
• Jordi Bascompte on Mutualistic Networks
• Ecological Stoichiometry: Population Dynamics
• Dynamics of Coupled Nutrient Cycling and Acclimation: 3 Modeling Papers
• Ecological Stoichiometry: The Perils of Famine and Plenty
• Multiple Goals in Floodplain Restoration - Workshop Notes

blog

• Displaying Math in RSS feeds
• A New, Shiny Website!
• Links and Resources

ggplot

• Ryan Peek on using xts and ggplot for time-series data
• A quick introduction to ggplot()

poster

• Trade-Offs and Synergies in Floodplain Management - A Historical-Ecological Approach

seminars

• Seminar in Ecological Stoichiometry: Day 1

code

• Debugging Tools in R with Michael Hannon
• A quick function for editing CSV files in R
• Displaying Math in RSS feeds

GAMs

• Exploring GAMs with Rosemary Hartman

rss

• Displaying Math in RSS feeds

D-RUG

• Robert Hijmans on Spatial Data Analysis
• FasteR! HigheR! StrongeR! - A Guide to Speeding Up R Code for Busy People
• Debugging Tools in R with Michael Hannon
• Demographic analysis using the `popbio` library and some other fun stuff
• Model Selection and Multi-Model Inference
• Mason Earles on interfacing R with the Forest Vegetation Simulator
• Ryan Peek on using xts and ggplot for time-series data
• Steve Culman on the `plyr` Package
• Don't R alone! A guide to tools for collaboration with R
• Exploring GAMs with Rosemary Hartman
• Ryan Peek on Customizing Your R Setup
• Chris Hamm on using plot.new() for better combined plots
• Stella Copeland's Intro to Mixed Models in R
• A quick introduction to ggplot()

hackery

• Setting up Automated Reprint Requests in Gmail

early-swarning-signals

• Pollen project sources

plotting

• Chris Hamm on using plot.new() for better combined plots

statistics

• Exploring GAMs with Rosemary Hartman

lecture

• Dynamics of Coupled Nutrient Cycling and Acclimation: 3 Modeling Papers

pollen

• Exploring Pollen Data
• Pollen project sources

plyr

• Steve Culman on the `plyr` Package

matrix-models

• Demographic analysis using the `popbio` library and some other fun stuff
• Lauren Yamane on Matrix Population Models in R

epidemiology

• Quals Reading: Four Reviews of Forest Epidemiology

open-access

• Setting up Automated Reprint Requests in Gmail
• My first peer-reviewed publication: Economics and Ecology of Open-Access Fisheries

FVS

• Mason Earles on interfacing R with the Forest Vegetation Simulator

upgoer5

• I try to figure out when many trees will die together

regime-shifts

• Regime Shifts in Forest Ecosystems

class

• Ecological Stoichiometry: Population Dynamics
• Dynamics of Coupled Nutrient Cycling and Acclimation: 3 Modeling Papers
• Ecological Stoichiometry: The Perils of Famine and Plenty

invasive-species

• Jo Albers on Invasive Species in a River Network

diseases

• Quals Reading: Four Reviews of Forest Epidemiology

R

• Printing R help files in the console or in knitr documents
• Dave Harris on Maximum Likelihood Estimation
• The null model for age effects with overdispersed infection
• A Null Model for Age Effects in Disease with Multiple Infections
• Robert Hijmans on Spatial Data Analysis
• Improved R Profiling Summaries
• FasteR! HigheR! StrongeR! - A Guide to Speeding Up R Code for Busy People
• Debugging Tools in R with Michael Hannon
• Demographic analysis using the `popbio` library and some other fun stuff
• Model Selection and Multi-Model Inference
• Mason Earles on interfacing R with the Forest Vegetation Simulator
• Ryan Peek on using xts and ggplot for time-series data
• Steve Culman on the `plyr` Package
• Don't R alone! A guide to tools for collaboration with R
• Lauren Yamane on Matrix Population Models in R
• A quick function for editing CSV files in R
• Simulating Sudden Oak Death Dynamics
• Exploring GAMs with Rosemary Hartman
• Ryan Peek on Customizing Your R Setup
• Chris Hamm on using plot.new() for better combined plots
• Stella Copeland's Intro to Mixed Models in R
• A quick introduction to ggplot()
• An R Users' Group in Davis
• Exploring Pollen Data

tools

• Don't R alone! A guide to tools for collaboration with R

mixedmodels

• Stella Copeland's Intro to Mixed Models in R

fisheries

• My first peer-reviewed publication: Economics and Ecology of Open-Access Fisheries

modeling

• Quals Reading: Modeling Philosophy
• Quals Reading: Modeling Philosophy
• Qualifying Exam Reading List

forests

• Mason Earles on interfacing R with the Forest Vegetation Simulator
• Quals Reading: Four Reviews of Forest Epidemiology
• Qualifying Exam Reading List
• A multi-species, age-structured model for forest disease
• Forest Ecology Journals
• Regime Shifts in Forest Ecosystems

early-warnings

• Early Warning Signals: the Charted and Uncharted Territories

twitter

• I try to figure out when many trees will die together

general

• A New, Shiny Website!
• Links and Resources
• Extinction debt, dark diversity, and how things are much worse than they look
• Can Novel Ecosystems Do the Job of "Natural" Ones?
• Climate Change and Credit Risk in the Chemicals Sector
• Delving into the Green Economy Report
• Of Billabongs, Weevils, and Alternative Stable States
• Tipping Points and the Precautionary Principle
• My article on rural abandonment and ecosystem services at GOOD
• George Sugihara on Early Warnings
• Jellyfish and Ocean Tipping Points
• REDD+ and Financial Resilience for Conservation
• Preparing for unexpected opportunities in Borneo
• Tackling investor risk in forest restoration
• Managing New Invasion Risks from Biofuel Crops
• Good environmental management lowers cost of borrowing
• Fishing for metrics
• Apparently, there's nothing left to learn about ecosystem services
• PricewaterhouseCoopers gets into the ecosystem services game
• What do we do with forecasts of the future?
• Thinking about TEEB
• New approaches to looking at water-related financial risks
• Reading philosophy can get you down
• Why the carbon market needs ecologists
• Saving more than species at Nagoya
• Liability for stolen ecosystem services
• Does ecology tell us that some species are worth more than others?
• Measuring resilience to climate-change driven crop failure
• In honeybee collapse, cure the patient, not just the disease.
• Rapid evolution as a warning sign
• Harmful algal blooms highlight risks from cascading ecological collapse
• Payments for ecosystem services are great, unless we do them enough to make a difference
• A species is priceless - does that mean that it is worth nothing or everything?
• Risk, Insurance, LUST, and Fish
• Money Quote
• In the News: Hysteresis in Coral Reefs
• Species in a Bucket

networks

• Jordi Bascompte on Mutualistic Networks

theory

• Jordi Bascompte on Mutualistic Networks

population-dynamics

• Lauren Yamane on Matrix Population Models in R

stoichiometry

• Ecological Stoichiometry: Population Dynamics
• Dynamics of Coupled Nutrient Cycling and Acclimation: 3 Modeling Papers
• Ecological Stoichiometry: The Perils of Famine and Plenty
• Seminar in Ecological Stoichiometry: Day 1

workshop

• Multiple Goals in Floodplain Restoration - Workshop Notes

model

• A multi-species, age-structured model for forest disease

dynamics

• Ecological Stoichiometry: Population Dynamics

ecology

• Multiple Goals in Floodplain Restoration - Workshop Notes

fish

• Carl Walters on Surprises in Adaptive Management at the Grand Canyon

open-lab-notebook

• Notes on S-maps and regime shifts
• Jan 17
• January 10, 2012
• Back in the Saddle January 9, 2012
• Forest Pest Outbreaks - A Bibliography
• Pollen project sources
• Monday, November 28, 2011

stoichiometry class notes

• Ecological Stoichiometry: Back to Basics with Elser

github

• Don't R alone! A guide to tools for collaboration with R

floodplains

• Multiple Goals in Floodplain Restoration - Workshop Notes
• Trade-Offs and Synergies in Floodplain Management - A Historical-Ecological Approach

journals

• Forest Ecology Journals

RStudio

• Don't R alone! A guide to tools for collaboration with R

grasslands

• Melinda D. Smith: Divergence in grassland responses to Fire and Grazing in N. America and S. Africa

water

• Carl Walters on Surprises in Adaptive Management at the Grand Canyon